Nano-Bio Engineering Group



Amir Shamloo, Professor


Mechanical Engineering Department, Sharif University of Technology


Ph.D, Stanford University


Postdoc, University of California, Berkeley

Research Interests


Design and Application of Microfluidics Devices

Modeling, Design and Fabrication of Nano-Mechanical Structures

Molecular Dynamic Simulation

Tissue Engineering and Biomaterials-Stem Cell Interactions

Computational Analysis of Biological Systems and Cell Mechanics

Finite Element Modeling of Elasto-Plastic Materials


Teaching Interests


Fluid Mechanics I

Fluid Mechanics II

Advanced Mathematics

Advanced Fluid Mechanics

Principles of Bioengineering

Applied Nanotechnology


Selected Publications

124- Haghighi, P., & Shamloo, A. (2021). Fabrication of a novel 3D scaffold for cartilage tissue repair: In-vitro and in-vivo study. Materials Science and Engineering: C128, 112285.

123- Nokoorani, Y. D., Shamloo, A., Bahadoran, M., & Moravvej, H. (2021). Fabrication and characterization of scaffolds containing different amounts of allantoin for skin tissue engineering. Scientific reports11(1), 1-20.

122- Nasiri, R., Shamloo, A., & Akbari, J. (2021). Design of a Hybrid Inertial and Magnetophoretic Microfluidic Device for CTCs Separation from Blood. Micromachines12(8), 877.

121- Rezaeian, M., Afjoul, H., Shamloo, A., Maleki, A., & Afjoul, N. (2021). Green synthesis of silica nanoparticles from olive residue and investigation of their anticancer potential. Nanomedicine16(18), 1581-1593.

120- Amerizadeh, A., Mashhadian, A., Farahnak-Ghazani, M., Arjmandi, H., Rad, M. A., Shamloo, A., ... & Nasiri-Kenari, M. (2021). Bacterial Receiver Prototype for Molecular Communication using Rhamnose Operon in a Microfluidic Environment. IEEE Transactions on NanoBioscience.

119- Ghazimirsaeed, E., Madadelahi, M., Dizani, M., & Shamloo, A. (2021). Secondary Flows, Mixing, and Chemical Reaction Analysis of Droplet-Based Flow inside Serpentine Microchannels with Different Cross Sections. Langmuir37(17), 5118-5130.

118- Forouzandehmehr, M., & Shamloo, A. (2021). High Haematocrit Blood Flow and Adsorption of Micro-and Nanoparticles on an Atherosclerotic Plaque: an in-silico study. Current Drug Delivery.

117- Amadeh, A., Ghazimirsaeed, E., Shamloo, A., & Dizani, M. (2021). Improving the performance of a photonic PCR system using TiO2 nanoparticles. Journal of Industrial and Engineering Chemistry94, 195-204.

116- Asadbegi, M., & Shamloo, A. (2021). Evaluating the multifunctionality of a new modulator of zinc-induced Aβ aggregation using a novel computational approach. Journal of Chemical Information and Modeling61(3), 1383-1401.

115- Ebrahimi, S., Vatani, P., Amani, A., & Shamloo, A. (2021). Drug delivery performance of nanocarriers based on adhesion and interaction for abdominal aortic aneurysm treatment. International Journal of Pharmaceutics594, 120153.

114- Shamloo, A., Naghdloo, A., & Besanjideh, M. (2021). Cancer cell enrichment on a centrifugal microfluidic platform using hydrodynamic and magnetophoretic techniques. Scientific reports11(1), 1-14.

113- Ebrahimi, S., Vatani, P., Amani, A., & Shamloo, A. (2021). Drug delivery performance of nanocarriers based on adhesion and interaction for abdominal aortic aneurysm treatment. International Journal of Pharmaceutics594, 120153.

112- Shamloo, A., Naghdloo, A., & Besanjideh, M. (2021). Cancer cell enrichment on a centrifugal microfluidic platform using hydrodynamic and magnetophoretic techniques. Scientific reports11(1), 1-14.

111- Amani, A., Shamloo, A., Barzegar, S., & Forouzandehmehr, M. (2021). Effect of Material and Population on the Delivery of Nanoparticles to an Atherosclerotic Plaque: A Patient-specific In Silico Study. Langmuir37(4), 1551-1562.

110- Shamloo, A., Aghababaie, Z., Afjoul, H., Jami, M., Bidgoli, M. R., Vossoughi, M., ... & Kamyabhesari, K. (2021). Fabrication and evaluation of chitosan/gelatin/PVA hydrogel incorporating honey for wound healing applications: An in vitro, in vivo study. International Journal of Pharmaceutics592, 120068.

109- Sarabi, M. R., Jiang, N., Ozturk, E., Yetisen, A. K., Tasoglu, S., Hosseini, V., ... & Khademhosseini, A. (2021). Devices and applications at the micro-and nanoscale rsc. li/locLab Chip21(660), 674-687.

108- Hosseini, V., Mallone, A., Nasrollahi, F., Ostrovidov, S., Nasiri, R., Mahmoodi, M., ... & Khademhosseini, A. (2021). Healthy and diseased in vitro models of vascular systems. Lab on a Chip21(4), 641-659.

107- Besanjideh, M., Shamloo, A., & Kazemzadeh Hannani, S. (2021). Enhanced oil-in-water droplet generation in a T-junction microchannel using water-based nanofluids with shear-thinning behavior: A numerical study. Physics of Fluids33(1), 012007.

106- Boodaghi, M., & Shamloo, A. (2020). Effects of wax boundaries in combination with evaporation on dynamics of fluid flow in paper-based devices. Surfaces and Interfaces, 100684.

105- Jokar, S., Erfani, M., Bavi, O., Khazaei, S., Sharifzadeh, M., Hajiramezanali, M., ... & Shamloo, A. (2020). Design of peptide-based inhibitor agent against amyloid-β aggregation: Molecular docking, synthesis and in vitro evaluation. Bioorganic Chemistry, 102, 104050.           

104- Erdem, A., Darabi, M. A., Nasiri, R., Sangabathuni, S., Ertas, Y. N., Alem, H., ... & Dokmeci, M. R. (2020). 3D Bioprinting of Oxygenated Cell‐Laden Gelatin Methacryloyl Constructs. Advanced healthcare materials, 9(15), 1901794.

103- Salehi, S. S., Shamloo, A., & Hannani, S. K. (2020). Parametric Study of Droplet Formation and Characteristics within Microfluidic Devices-A Case Study. International Journal of Applied Mechanics.

102- Nasiri, R., Shamloo, A., Akbari, J., Tebon, P., R Dokmeci, M., & Ahadian, S. (2020). Design and Simulation of an Integrated Centrifugal Microfluidic Device for CTCs Separation and Cell Lysis. Micromachines, 11(7), 699.

101- Ashammakhi, N., Nasiri, R., De Barros, N. R., Tebon, P., Thakor, J., Goudie, M., ... & Khademhosseni, A. (2020). Gut-on-a-chip: Current progress and future opportunities. Biomaterials, 120196.

100- Nasiri, R., Shamloo, A., Ahadian, S., Amirifar, L., Akbari, J., Goudie, M. J., ... & Khademhosseini, A. (2020). Microfluidic‐Based Approaches in Targeted Cell/Particle Separation Based on Physical Properties: Fundamentals and Applications. Small, 2000171.

99- Shamloo, A., & Hassani-Gangaraj, M. (2020). Investigating the effect of reagent parameters on the efficiency of cell lysis within droplets. Physics of Fluids, 32(6), 062002.

98- Madadelahi, M., Madou, M. J., Nokoorani, Y. D., Shamloo, A., & Martinez-Chapa, S. O. (2020). Fluidic barriers in droplet-based centrifugal microfluidics: Generation of multiple emulsions and microspheres. Sensors and Actuators B: Chemical, 311, 127833.

97- Bahadoran, M., Shamloo, A., & Nokoorani, Y. D. (2020). Development of a polyvinyl alcohol/sodium alginate hydrogel-based scaffold incorporating bFGF-encapsulated microspheres for accelerated wound healing. Scientific Reports, 10(1), 1-18.

96- Afjoul, H., Shamloo, A., & Kamali, A. (2020). Freeze-gelled alginate/gelatin scaffolds for wound healing applications: An in vitro, in vivo study. Materials Science and Engineering: C, 110957.

95- Shamloo, A., Rostami, P., & Mahmoudi, A. (2020). PASylation Enhances the Stability, Potency, and Plasma Half‐Life of Interferon α‐2a: A Molecular Dynamics Simulation. Biotechnology Journal, 1900385.

94- Shamloo, A., Ebrahimi, S., Amani, A., & Fallah, F. (2020). targeted Drug Delivery of Microbubble to Arrest Abdominal Aortic Aneurysm Development: A Simulation Study towards optimized Microbubble Design. Scientific Reports, 10(1), 1-17.

93- van Loo, B., Salehi, S. S., Henke, S., Shamloo, A., Kamperman, T., Karperien, M., & Leijten, J. (2020). Enzymatic Outside-In Crosslinking Enables Single-step Microcapsule Production for High-throughput 3D Cell Microaggregate Formation. Materials Today Bio, 100047.

92- Hajiabbas, M., Alemzadeh, I., Vossoughi, M., & Shamloo, A. (2020). In-situ crosslinking of electrospun gelatin-carbodiimide nanofibers: fabrication, characterization, and modeling of solution parameters. Chemical Engineering Communications, 1-17.

91- Salehi, S. S., Shamloo, A., & Hannani, S. K. (2020). Microfluidic technologies to engineer mesenchymal stem cell aggregates—applications and benefits. Biophysical Reviews, 1-11.

90- Kamali, A., & Shamloo, A. (2020). Fabrication and evaluation of a bilayer hydrogel-electrospinning scaffold prepared by the freeze-gelation method. Journal of Biomechanics98, 109466.

89- Ren, L., Zhou, X., Nasiri, R., Fang, J., Jiang, X., Wang, C., ... & Hartel, M. C. (2020). Combined Effects of Electric Stimulation and Microgrooves in Cardiac Tissue‐on‐a‐Chip for Drug Screening. Small Methods, 2000438.

88- Shamloo, A., Yazdani, A., & Saghafifar, F. (2020). Investigation of a two‐step device implementing magnetophoresis and dielectrophoresis for separation of circulating tumor cells from blood cells. Engineering in Life Sciences.

87- Verlinden, E. J., Madadelahi, M., Sarajlic, E., Shamloo, A., Engel, A. H., Staufer, U., & Ghatkesar, M. K. (2020). Volume and concentration dosing in picolitres using a two-channel microfluidic AFM cantilever. Nanoscale, 12(18), 10292-10305.

86- Gholami, A., & Shamloo, A. (2020). Antibody consumption reduction in lateral flow immunoassays within porous media. Chemical Engineering and Processing-Process Intensification, 147, 107773.

85- Boodaghi, Miad, and Amir Shamloo. "A comparison of different geometrical elements to model fluid wicking in paper‐based microfluidic devices." AIChE Journal 66.1 (2020): e16756.

84- Yousefsani, S. A., Shamloo, A., & Farahmand, F. (2019). Nonlinear mechanics of soft composites: hyperelastic characterization of white matter tissue components. Biomechanics and Modeling in Mechanobiology, 1-11.

83- Mashhadian, A., & Shamloo, A. (2019). Inertial microfluidics: A method for fast prediction of focusing pattern of particles in the cross section of the channel. Analytica chimica acta, 1083, 137-149.

82- Jokar, S., Khazaei, S., Behnammanesh, H., Shamloo, A., Erfani, M., Beiki, D., & Bavi, O. (2019). Recent advances in the design and applications of amyloid-β peptide aggregation inhibitors for Alzheimer’s disease therapy. Biophysical reviews, 1-25.

81- Shamloo, A., Abdorahimzadeh, S., & Nasiri, R. (2019). Exploring contraction–expansion inertial microfluidic‐based particle separation devices integrated with curved channels. AIChE Journal, 65(11), e16741.

80- Shamloo, A., Kamali, A., & Fard, M. R. B. (2019). Microstructure and characteristic properties of gelatin/chitosan scaffold prepared by the freeze-gelation method. Materials Research Express, 6(11), 115404.

79- Seyedmahmoud, R., Çelebi-Saltik, B., Barros, N., Nasiri, R., Banton, E., Shamloo, A., ... & Ahadian, S. (2019). Three-Dimensional Bioprinting of Functional Skeletal Muscle Tissue Using Gelatin Methacryloyl-Alginate Bioinks. Micromachines, 10(10), 679.

78- Asadbegi, M., & Shamloo, A. (2019). Identification of a Novel Multifunctional Ligand for Simultaneous Inhibition of Amyloid-Beta (Aβ42) and Chelation of Zinc Metal Ion. ACS Chemical Neuroscience, 10(11), 4619-4632.

77- Boodaghi, M., Shamloo, A., (2020) A comparison of different geometrical elements to model fluid wicking in paper‐based microfluidic devices, AIChE Journal, In press.

76- Shamloo A., Forouzandehmehr M., (2019) Personalised deposition maps for micro-and nanoparticles targeting an atherosclerotic plaque: attributions to the receptor-mediated adsorption on the inflamed endothelial cells, Biomechanics and modeling in mechanobiology 18 (3), 813-828.

75- Madadelahi, M., Ghazimirsaeed, E., Shamloo, A., (2019) Design and fabrication of a two-phase diamond nanoparticle aided fast PCR device, Analytica chimica acta 1068, 28-40.

74- Shamloo, A., Abdorahimzadeh, S., Nasiri, R., (2019) Exploring contraction–expansion inertial microfluidic‐based particle separation devices integrated with curved channels, AIChE Journal, In press.

73- Mashhadian, A., Shamloo, A., (2019) Inertial microfluidics: A method for fast prediction of focusing pattern of particles in the cross section of the channel, Analytica Chimica Acta.

72- Shamloo, A., Alsadat Rad, M., Ahmadian, MT., Amirifar, L., (2019) Investigation of interaction between quartz nanostructures and human cell lines for tissue engineering, Scientia Iranica.

71- Mohseni, M., Shamloo, A., Aghababaie, Z., Afjoul, H., Abdi, S., Moravvej, H., ..., (2019) A comparative study of wound dressings loaded with silver sulfadiazine and silver nanoparticles: In vitro and in vivo evaluation, International journal of pharmaceutics 564, 350-358.

70- Shamloo, A., Besanjideh, M., (2019) Investigation of a Novel Microfluidic Device for Label-Free Ferrohydrodynamic Cell Separation on a Rotating Disk, IEEE Transactions on Biomedical Engineering.

69- Shamloo, A., Amani, A., Forouzandehmehr, M., Ghoytas, I., (2019) In silico study of patient-specific magnetic drug targeting for a coronary LAD atherosclerotic plaque, International journal of pharmaceutics 559, 113-129.

68- Nematollahisarvestani, A., Shamloo, A., (2019) Dynamics of a magnetically rotated micro swimmer inspired by paramecium metachronal wave, Progress in biophysics and molecular biology 142, 32-42.

67- Shamloo, A., Parast, FY., (2019) Simulation of Blood Particle Separation in a Trapezoidal Microfluidic Device by Acoustic Force, IEEE Transactions on Electron Devices 66 (3), 1495-1503

66- Norouzi, SK., Shamloo, A., (2019) Bilayered heparinized vascular graft fabricated by combining electrospinning and freeze drying methods, Materials Science and Engineering: C 94, 1067-1076

65- Naghdloo A., Ghazimirsaeed E., Shamloo A. (2019) Numerical simulation of mixing and heat transfer        in an integrated centrifugal microfluidic system for nested-PCR amplification and gene detection, Sensors and Actuators B: Chemical 283, 831-841 .

64- Khakrah, H., Shamloo, A., Hannani, S.K., (2018) Exergy analysis of parabolic trough solar collectors using Al2O3/synthetic oil nanofluid, Solar Energy, 173, 1236-1247.

63- Vatankhah, P., Shamloo, A., (2018) Parametric study on mixing process in an in-plane spiral micromixer utilizing chaotic advection, Analytica Chimica Acta, 1022, 96-105.

62- Shamloo, A., Asadbegi, M., Khandan, V., Amanzadi, A., (2018) Designing a new multifunctional peptide for metal chelation and Aβ inhibition, Archives of biochemistry and biophysics, In print.

61- Shamloo A., Ahmad, S., Momeni, M., (2018) Design and parameter study of integrated microfluidic platform for CTC isolation and enquiry; A numerical approach, Biosensors 8 (2), 56.

60- Yousefsani, S.A., Farahmand, F., Shamloo, A., (2018) A three-dimensional micromechanical model of brain white matter with histology-informed probabilistic distribution of axonal fibers, Journal of the mechanical behavior of biomedical materials 88, 288-295.

59- Gholami, A., Shamloo, A., (2018) Molecular Dynamics Simulation of PASylated G-CSF and Proposing a Modified PAS String Sequence in order to Improve Drug’s Properties, Iranian Journal of Biomedical Engineering, 4, 303-311.

58- Mehrafrooz, B., Shamloo, A., (2018) Mechanical differences between ATP and ADP actin states: A molecular dynamics study, Journal of theoretical biology, 448, 94-103.

57- Kashanian, F., Masoudi, M.M., Shamloo, A., Habibi-Rezaei, M., (2018) Modeling, simulation, and employing dilution–dialysis microfluidic chip (DDMC) for heightening proteins refolding efficiency, Bioprocess and biosystems engineering 41 (5), 707-714.

56- Yousefsani, S.A., Shamloo, A., Farahmand, F., (2018) Micromechanics of brain white matter tissue: A fiber-reinforced hyperelastic model using embedded element technique, Journal of the mechanical behavior of biomedical materials, 80, 194-202.

55- Shamloo, A., Sarmadi, M., Aghababaie, Z., Vossoughi, M., (2018) Accelerated full-thickness wound     healing via sustained bFGF delivery based on a PVA/chitosan/gelatin hydrogel incorporating PCL      microspheres, International journal of pharmaceutics, 537, 278-289.

54- Shamloo, A., Mashhadian, A., (2018) Inertial particle focusing in serpentine channels on a centrifugal      platform, Physics of Fluids 30 (1), 012002.

53- Kashanian. F., Kokkinis, G., Bernardi, J., Zand, M.R., Shamloo, A., Giouroudi I. (2018). A novel     magnetic microfluidic platform for on-chip separation of 3 types of silica coated magnetic nanoparticles    (Fe3O4@ SiO2), Sensors and Actuators A: Physical, 270, 223-230.

52- Shamloo, A., Boodaghi, M. (2018). Design and simulation of a microfluidic device for acoustic cell separation, Ultrasonics 84, 234-243.

51- Shamloo, A., Mehrafrooz, B. (2018) Nanomechanics of actin filament: A molecular dynamics       simulation, Cytoskeleton 75 (3), 118-130.

50- Madadelahi, M, Shamloo, A. (2018) Newtonian and generalized Newtonian reacting flows in serpentine        microchannels: pressure driven and centrifugal microfluidics, Journal of Non-Newtonian Fluid Mechanics, 251, 88-96.

49- Manuchehrfar, F., Shamloo, A., (2018) Mechanical Behavior of Axonal Microtubules; The Effect of Fluid On the Rupture of Axonal Microtubules, BioRxiv, 378455.

48- Forouzandehmehr, M., & Shamloo, A. (2018). Margination and adhesion of micro-and nanoparticles in the coronary circulation: a step towards optimised drug carrier design. Biomechanics and Modeling in Mechanobiology 17 (1), 205-221.

47- Madadelahi, M., & Shamloo, A. (2017). Droplet-based flows in serpentine microchannels: Chemical reactions and secondary flows. International Journal of Multiphase Flow, 97, 186-196.

46-   Shamloo, A., & Kamali, A. (2017). Numerical analysis of a Dielectrophoresis field‐flow fractionation device for the separation of multiple cell types. Journal of Separation Science.

45- Gilani, A., Koohsorkhi, J., & Shamloo, A. (2017). Novel method for cell penetration based on MEMS technology with failure and impacting characterization of mouse ooctye membrane. Sensors and Actuators A: Physical, 263, 461-470.

44- Hassani-Ardekani, H., Niroomand-Oscuii, H., Nikbin, E., Shamloo, A. (2017). Molecular dynamics simulation of the dissociation mechanism of P-selectin from PSGL-1. Journal of Theoretical and Computational Chemistry.

43- Khakrah, H., Shamloo, A., & Hannani, S. K. (2017). Determination of Parabolic Trough Solar Collector Efficiency Using Nanofluid: A Comprehensive Numerical Study. Journal of Solar Energy Engineering, 139(5), 051006.

42- Shamloo, A., Madadelahi, M., & Abdorahimzadeh, S. (2017). Three-dimensional numerical simulation of a novel electroosmotic micromixer. Chemical Engineering and Processing: Process Intensification.

41- Shamloo, A., Nejad, M. A., & Saeedi, M. (2017). Fluid–structure interaction simulation of a cerebral aneurysm: Effects of endovascular coiling treatment and aneurysm wall thickening. Journal of the Mechanical Behavior of Biomedical Materials, 74, 72-83.

40- Asadzade, M., & Shamloo, A. (2017). Design and simulation of a novel bipolar plate based on lung‐shaped bio‐inspired flow pattern for PEM fuel cell. International Journal of Energy Research.

39- Shamloo, A., Vatankhah, P., & Akbari, A. (2017). Analyzing mixing quality in a curved centrifugal micromixer through numerical simulation. Chemical Engineering and Processing: Process Intensification, 116, 9-16.

38- Moradi, M., Shamloo, A., Asadbegi, M., & Dezfuli, A. D. (2017). Three dimensional pressure transient behavior study in stress sensitive reservoirs. Journal of Petroleum Science and Engineering, 152, 204-211.

37- Sarmadi, M., Shamloo, A., & Mohseni, M. (2017). Utilization of Molecular Dynamics Simulation Coupled with Experimental Assays to Optimize Biocompatibility of an Electrospun PCL/PVA Scaffold. PloS one, 12(1), e0169451.

36- Shamloo, A., Selahi, A., & Madadelahi, M. (2017). Designing and modeling a centrifugal microfluidic device to separate target blood cells. Journal of Micromechanics and Microengineering, 26(3), 035017.

35- Shamloo, A., & Sarmadi, M. (2016). Investigation of the adhesive characteristics of polymer–protein systems through molecular dynamics simulation and their relation to cell adhesion and proliferation. Integrative Biology, 8(12), 1276-1295.

34- Shamloo, A., Vatankhah, P., & Bijarchi, M. A. (2016). Numerical optimization and inverse study of a microfluidic device for blood plasma separation. European Journal of Mechanics-B/Fluids, 57, 31-39.

33- Shamloo, A., Pedram, M. Z., Heidari, H., & Alasty, A. (2016). Computing the blood brain barrier (BBB) diffusion coefficient: A molecular dynamics approach. Journal of Magnetism and Magnetic Materials, 410, 187-197.

32- Shamloo, A., Mohammadaliha, N., Heilshorn, S. C., & Bauer, A. L. (2016). A comparative study of collagen matrix density effect on endothelial sprout formation using experimental and computational approaches. Annals of biomedical engineering, 44(4), 929-941.

31- Shamloo, A., Mirzakhanloo, M., & Dabirzadeh, M. R. (2016). Numerical Simulation for efficient mixing of Newtonian and non-Newtonian fluids in an electro-Osmotic Micro-Mixer. Chemical Engineering and Processing: Process Intensification.

30- Shamloo, A., Merdasi, A., & Vatankhah, P. (2016). Numerical Simulation of Heat Transfer in Mixed Electroosmotic Pressure-Driven Flow in Straight Microchannels. Journal of Thermal Science and Engineering Applications, 8(2), 021011.

29- Shamloo, A., Madadelahi, M., & Akbari, A. (2016). Numerical simulation of centrifugal serpentine micromixers and analyzing mixing quality parameters. Chemical Engineering and Processing: Process Intensification, 104, 243-252.

28- Sarvestani, A. N., Shamloo, A., & Ahmadian, M. T. (2016). Simulation of Paramecium Chemotaxis Exposed to Calcium Gradients. Cell biochemistry and biophysics, 1-12.

27- Moradi, M., Shamloo, A., & Dezfuli, A. D. (2016). A sequential implicit discrete fracture model for three-dimensional coupled flow-geomechanics problems in naturally fractured porous media. Journal of Petroleum Science and Engineering.

26- Pedram, M. Z., Shamloo, A., GhafarZadeh, E., & Alasty, A. (2016). Dynamic Analysis of Magnetic Nanoparticles Crossing Cell Membrane. Journal of Magnetism and Magnetic Materials.

25- Pedram, M. Z., Shamloo, A., Alasty, A., & Ghafar-Zadeh, E. (2016). Optimal Magnetic Field for Crossing Super-Para-Magnetic Nanoparticles through the Brain Blood Barrier: A Computational Approach. Biosensors, 6(2), 25.

24- Kiyoumarsioskouei, A., Shamloo, A., Azimi, S., Abeddoust, M., & Saidi, M. (2016). A computational model for estimation of mechanical parameters in chemotactic endothelial cells. Scientia Iranica. Transaction B, Mechanical Engineering, 23(1), 260.

23- Heidari, H., & Shamloo, A. (2016). The effect of rippled graphene sheet roughness on the adhesive characteristics of a collagen–graphene system. International Journal of Adhesion and Adhesives, 64, 9-14.

22- Mohseni, M., Shamloo, A., Aghababaei, Z., Vossoughi, M., & Moravvej, H. (2016). Antimicrobial Wound Dressing Containing Silver Sulfadiazine with High Biocompatibility: In Vitro Study. Artificial organs.

21- Esmaeili, E., Soleimani, M., Shamloo, A., Mahmoudifard, M., & Vossoughi, M. (2016). Dual improvement of DNA-directed antibody immobilization utilizing magnetic fishing and a polyamine coated surface. RSC Advances, 6(112), 111210-111216.

20- Shamsi, A., Shamloo, A., Mohammadaliha, N., Hajghassem, H., Mehrabadi, J. F., & Bazzaz, M. (2015). High throughput blood plasma separation using a passive PMMA microfluidic device. Microsystem Technologies, 1-8.

19- Shamloo, A., Sharifi, F., Salehi, S. S., Amirifar, L., & Firoozabadi, B. (2015). Performance optimization of microreactors by implementing geometrical and fluid flow control in the presence of electric field: a computational study. Microsystem Technologies, 21(6), 1275-1285.

18- Shamloo, A., Mohammadaliha, N., & Mohseni, M. (2015). Integrative utilization of microenvironments, biomaterials and computational techniques for advanced tissue engineering. Journal of biotechnology, 212, 71-89.

17- Shamloo, A., Golgoon, A., & Zadeh, E. G. (2015). Role of α and β Transmembrane Domains in Integrin Clustering. Paper presented at the Actuators.

16- Shamloo, A., Manuchehrfar, F., & Rafii-Tabar, H. (2015). A viscoelastic model for axonal microtubule rupture. Journal of biomechanics, 48(7), 1241-1247.

15- Shamloo, A., & Amirifar, L. (2015). A microfluidic device for 2D to 3D and 3D to 3D cell navigation. Journal of Micromechanics and Microengineering, 26(1), 015003.

14- Shamloo, A., Heibatollahi, M., & Mofrad, M. R. (2015). Directional migration and differentiation of neural stem cells within three-dimensional microenvironments. Integrative Biology, 7(3), 335-344.

13- Abeddoust, M., & Shamloo, A. (2015). A model for cell density effect on stress fiber alignment and collective directional migration. Physical biology, 12(6), 066023.

12- Pedram, M. Z., Shamloo, A., Alasty, A., & Ghafar-Zadeh, E. (2015b). Toward Epileptic Brain Region Detection Based on Magnetic Nanoparticle Patterning. Sensors, 15(9), 24409-24427.

11- Shamloo, A. (2014a). Cell‐cell interactions mediate cytoskeleton organization and collective endothelial cell chemotaxis. Cytoskeleton, 71(9), 501-512.

10- Shamloo, A., Manchandia, M., Ferreira, M., Mani, M., Nguyen, C., Jahn, T., Heilshorn, S. (2013). Complex chemoattractive and chemorepellent Kit signals revealed by direct imaging of murine mast cells in microfluidic gradient chambers. Integrative Biology, 5(8), 1076-1085.

9- Shamloo, A., Xu, H., & Heilshorn, S. (2011). Mechanisms of vascular endothelial growth factor-induced pathfinding by endothelial sprouts in biomaterials. Tissue Engineering Part A, 18(3-4), 320-330.

8- Shamloo, A., Kuhnert, F., Choksi, V., Kuo, C., & Heilshorn, S. (2010). Novel Receptor-Mediated Endothelial Cell Chemotaxis. Biophysical Journal, 98(3), 497a.

7- Shamloo, A., & Heilshorn, S. C. (2010a). Matrix density mediates polarization and lumen formation of endothelial sprouts in VEGF gradients. Lab on a Chip, 10(22), 3061-3068.

6- Shamloo, A., & Heilshorn, S. C. (2010c). Matrix Rigidity Mediates Growth Factor Response during 3D Endothelial Cell Sprouting. Biophysical Journal, 98(3), 730a.

5- Kuhnert, F., Mancuso, M. R., Shamloo, A., Wang, H.-T., Choksi, V., Florek, M, Heilshorn, S. C. (2010). Essential regulation of CNS angiogenesis by the orphan G protein–coupled receptor GPR124. Science, 330(6006), 985-989.

4- Shamloo, A., Ma, N., Poo, M.-m., Sohn, L. L., & Heilshorn, S. C. (2008). Endothelial cell polarization and chemotaxis in a microfluidic device. Lab on a Chip, 8(8), 1292-1299.

3- Khoei, A., Shamloo, A., & Azami, A. (2006). Extended finite element method in plasticity forming of powder compaction with contact friction. International Journal of Solids and Structures, 43(18), 5421-5448.

2- Khoei, A., Shamloo, A., Anahid, M., & Shahim, K. (2006). The extended finite element method (X-FEM) for powder forming problems. Journal of materials processing technology, 177(1), 53-57.

1- Shamloo, A., Azami, A., & Khoei, A. (2005). Modeling of pressure-sensitive materials using a cap plasticity theory in extended finite element method. Journal of materials processing technology, 164, 1248-1257.

  مهرافروز, شاملو, فیروزبخش , مطالعه خواص مکانیکی پروتئین اکتین تحت بارگذاری کششی با استفاده از شبیه‌سازی دینامیک مولکولی مهندسی مکانیک مدرس 2016 (8), 375-383



Selected Conference Publication


46- Shamloo, A., Naghdloo, A., (2018) An experimental study of a novel design of a Lab Disk for separation of targeted tumor cells, 18th European Congress on Biotechnology, Geneva, Switzerland.

45- Shamloo, A., Mashhadian, A., (2018) An inertial microfluidic device for targeted cell separation, 18th European Congress on Biotechnology, Geneva, Switzerland.

44- Shamloo, A., Afjool, H., Dorri Nokoorani, Y., Bahadoran, M., Motahari, S., (2018) The effect of polymer concentration and homogenizer rate on microspheres structure fabricated by double-emulsion method, 1st International Iranian Tissue Engineering and Regenerative Medicine congress, Sharif University of Technology, Tehran, Iran.

43- Dorri Nokoorani, Y., Shamloo, A., (2018) Comparison of the Effect of EDC and Glutaraldehyde as Cross-linkers on Morphology and Swelling Ratio of Gelatin/Chitosan Scaffolds for Use in Skin Tissue Engineering, 25th national and 3th international Iranian conference on biomedical engineering, Shahabdanesh University, Iran.

42- Verlinden, E.J., Madadelahi, M., Sarajlic, E., Shamloo, A., Engel, A.H., Staufer, U., Ghatkesar, M.K., (2018) Multiple fluid handling at picolitre flowrates using a 2-channel hollow AFM cantilever, 44th International Conference on Micro and Nanoengineering (MNE), Netherlands.

41- Madadelahi, M., Kalan, K., Shamloo, A., (2018) Designing a Polymerase Chain Reaction Device Working with Radiation and Convection Heat Transfer, IOP Conference Series: Materials Science and Engineering 350 (1), 012010. Netherlands.

40- Amirifar, L., & Shamloo, A., (2018) Design of a Microfluidic Device Performing as a Blood-Brain Barrier On a Chip, 2nd National Conference of Microfluidic and its Applications in Engineering and Medicine, Iran.

39- Forouzandehmehr, M., & Shamloo, A. (2018). Numerical Study of Blood Hematocrit Influence on Margination and Adhesion of Nanoparticles in the Coronary Circulation and its Role in Drug Delivery, The 25th Annual International Conference on Mechanical Engineering, Iran.

38- Salehi, S.S., Shamloo, A., (2017) Design and Fabrication of a Scaffold with Appropriate Features for      Cartilage Tissue Engineering, World Academy of Science, Engineering and Technology, Netherlands.

37- Madadelahi, M., Shamloo, A., Salehi, S.S., (2017) Numerical simulation of bio-chemical diffusion in    bone scaffolds, World Academy of Science, Engineering and Technology, Netherlands.

36- Amirifar, L., & Shamloo, A., (2017) Numerical Simulation of a Microfluidic Platform for Controlled Double Concentration Gradient Generation of Biochemical Cues to Differentiate Neural Stem Cells, 2nd National Festival and International Congress of Stem Cell and Regenerative Medicine Technology, Iran.

35- Hagiabbas, M., Alamzadeh, I., Vossoughi, M., Shamloo, A., (2017) Recent progress in wound healing from wound dressing to skin tissue engineering and skin, 3rd National Congress and Second International Congress of Stem Cells and Regenerative Medicine, Iran.

34- Mehrafrooz, B., Shamloo, A., Firoozbakhsh, k., (2016) Computational nanomechanics of actin filament: A Molecular dynamics study, 6th international congress on Nano-science and nanotechnology, Iran.

33- Shamloo, A., Sarmadi, M., Kalan, K., (2016) Using Molecular Dynamics Simulation to Optimize Biocompatibility of a Heterogeneous PVA/PCL Scaffold Based on Protein Adsorption, 1st International conference on new research achievements in mechanics, mechatronics and biomechanics, Iran.

32- Pedram, M. Z., Shamloo, A., Alasty, A., & Ghafar-Zadeh, E. (2015a). Superparamagnetic Nanoparticles for Epilepsy Detection. Paper presented at the World Congress on Medical Physics and Biomedical Engineering, June 7-12, 2015, Toronto, Canada.

31- Pedram, M. Z., Shamloo, A., Alasti, A., & Zadeh, E. G. (2015). Steered Molecular Dynamic Simulation Approaches for computing the Blood Brain Barrier (BBB) Diffusion Coefficient. Paper presented at the World Congress on Medical Physics and Biomedical Engineering, June 7-12, 2015, Toronto, Canada.

30- Pedram, M. Z., Shamloo, A., Alasty, A., & Ghafar-Zadeh, E. (2015c). MRI-guided epilepsy detection. Paper presented at the 2015 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

29- Shamloo, A., Nikbin, E., Mehboudi, N., & Damirchi, B. (2014). Homo-oligomerization of transmembrane α-domain of integrin. Paper presented at the 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

28- Shamloo, A., GhafarZadeh, E., & Alasty, A. (2014). Modeling and simulation of crossing magnetic nanoparticles through Blood Brain Barrier (BBB). Paper presented at the 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

27- Mohseni, M., Shamloo, A., Samani, S. A., & Dodel, M. (2014). Thickness as an important parameter in designing vascular grafts. Paper presented at the Biomedical Engineering (ICBME), 2014 21th Iranian Conference on.

26- Manuchehrfar, F., & Shamloo, A. (2014). Three dimensional modeling of axonal microtubules. Paper presented at the Biomedical Engineering (ICBME), 2014 21th Iranian Conference on.

25- Shamloo, A. (2014b). Neuronal cell navigation within a microfluidic device. Paper presented at the 2nd Middle East Conference on Biomedical Engineering.

24- Manuchehrfar, F., Shamloo, A., & Mehboudi, N. (2014). Dynamic response of axonal microtubules under suddenly applied end forces. Paper presented at the 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

23- Shamloo, A., Heibatollahi, M., & Ghafar-Zadeh, E. (2012). Parallel in-vitro and in-vivo techniques for optimizing cellular microenvironments by implementing biochemical, biomechanical and electromagnetic stimulations. Paper presented at the 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

22- Khoei, A., Anahid, M., Biabanaki, S., Yadegaran, I., Shahim, K., Nikbakht, M., & Shamloo, A. (2008). An Enriched Finite Element Modeling for Metal Forming Processes. Paper presented at the Proceedings of the International MultiConference of Engineers and Computer Scientists.



19- Shamloo A, Mofrad M. Microfluidic devices as in-vitro mimics of cellular Microenvironments, Invited talk, University of California, Berkeley, April 2011.

18- Shamloo A. Microfluidic devices and nano-biomaterials to analyze the biochemical and biomechanical

    effectors of cellular growth, Invited talk, Sharif University of Technology, Tehran, Iran, December 2010.

17- Shamloo A, Nguyen CH, Manchandia MD, Weinberg K, Heilshorn SC. Paradoxical dose-dependent chemoattractive and chemorepellent effects of Kit ligand (KL) revealed in novel microfluidic biochambers. Society of Hematology conference, Orlando, FL, December 2010.

16- Shamloo A, Heilshorn SC. The interplay between biomechanical and biochemical factors regulates   lumen formation and navigation of endothelial cell sprouts, ASME summer bioengineering conference, Naples, FL, June 2010.

15- Shamloo A, Heilshorn SC. A three-dimensional micro-environment for characterizing endothelial cell    sprouting, Society for Biomaterials, Seattle, WA, April 2010.

14- Shamloo A, Heilshorn SC. Microfluidic models of endothelial cell sprouting in response to biomechanical and biochemical Microenvironments, AVS Symposium, San Jose, CA, Nov 2009.

13- Shamloo A, Heilshorn SC. Matrix rigidity mediates growth factor response during 3D endothelial cell sprouting, 2009 Joint ASCE-ASME-SES Conference on Mechanics and Materials, Blacksburg, VA, June 2009.

12- Shamloo A, Khoei. AR, Application of extended finite element method (XFEM) in double-surface plasticity model, 1st National Congress on Civil Engineering (NCCE), Tehran, Iran, May 2004.

11- Shamloo A, Mofrad M. Stem cell culture and differentiation within microfluidic devices, Stem cell seminar, University of California, Berkeley, March 2011.

10- Shamloo A, Mofrad M. Neural stem cell differentiation under mechanochemical effectors, Stem cell retreat, Asilomar, CA, April 2011.

9- Shamloo A, Heilshorn SC. Novel receptor –mediated endothelial cell chemotaxis, Biophysical Society, San Francisco, CA, Feb. 2010.

8- Shamloo A, Heilshorn SC. Concentration gradient generation for mammalian cell culture using a novel

    microfluidic device. Nanotech 2008 - 11th Annual NSTI Nanotechnology, Boston, MA, June 2008.

7- Shamloo A, Heilshorn SC. A shear-free microfluidic device for mammalian cell chemotaxis. Bio-X Interdisciplinary Initiatives, Stanford, CA, Feb 2008

6- Shamloo A, Heilshorn SC. A novel microfluidic device for endothelial cell chemotaxis. Cardiovascular

    Institute Retreat, Stanford, CA, Feb 2008.

5- Khoei AR, Shamloo A, Anahid M, Shahim K, The extended finite element method (X-FEM) for powder forming problems, 11th International Conference on Metal Forming, Birmingham, UK, Sep 2006.

4- Khoei AR, Anahid M, Shahim K, Shamloo A, A new technique based on the extended finite element     method in simulation of powder compaction processes, International Council on Mining and Metals (ICMM), Malaysia, March 2006.

3- Khoei AR, Anahid M, Azami AR, Shamloo A, An extended finite element method for compaction simulation of powder forming processes using a three-invariant cap plasticity, 9th International Conference on Material Forming (ESAFORM), Glasgow, UK, April 2006.

2- Shamloo A, Azami AR, Khoei AR, Modeling of pressure-sensitive materials using a cap plasticity theory in extended finite element method, International Conference on Advances in Materials and Processing Technologies (AMPT), Gliwice, Poland, May 2005.

1- Khoei AR, Shamloo A, Implementation of extended finite element method in pressure-sensitive material using cap plasticity model, 3rd International Conference on Advances in Structural Engineering and Mechanics (ASEM), Seoul, Korea, September 2004.